Skip to main content
. 2017 Apr 4;8:439. doi: 10.3389/fpls.2017.00439

FIGURE 2.

FIGURE 2

Phylogenetic relationships of plant AFL gene family and the details of the part of vascular plant. (A) ML phylogenetic relationships of plant AFL gene family comprising 264 sequences from 72 taxa (Table 1 for species names see Supplementary Table S2). (B) ML rooted tree of vascular plant AFL using PpaABI3 sequences as outgroups (black). Numbers at the branches indicate bootstrap values calculated from 1,000 replicates. Only values higher than 50% are shown. (C) Domain structure of each clade and type, three clades divided into 10 types in total. (D) AAs characteristic of the B1 and B2 domain. The sequence logo was generated using WebLogo (weblogo.berkeley.edu/). (E) Expression pattern analysis of several AFL genes; expression levels are calculated using the database GENEVESTIGATOR, ConGenIE (Supplementary Figure S3), and data from previous studies (Zeng et al., 2003; Zhang and Xue, 2013).