Table 2.

The abundance of conserved and known miRNAs family in cucumber tissues

	Lines 9930			hardwickii
	Roots	Stems	Leaves	Roots	Stems	Leaves
Conserved miRNA
miR156	41157.79	17310.32	34671.86	69197.32	26787.81	55323.58
miR159	245.42	267.45	440.81	170.31	177.06	267.73
miR160	627.02	405.39	274.5	43.93	49.12	55.23
miR162	135.23	32.1	15.43	130.26	35.35	46.20
miR164	918.65	1323.1	76.88	289.72	800.64	285.01
miR166	5334.08	12579.6	14272.63	15591.71	52495.52	62135.22
miR167	18016.33	4690.6	12650	3119.19	2667.24	16258.88
miR168	2306.63	3177.99	1745.72	5488.06	7501.65	5942.70
miR169	358.34	90.92	74.25	28.28	297.74	260.28
miR171	64.47	55.52	84.86	44.12	73.44	186.50
miR172	958.22	533.97	757.13	182.34	905.20	1639.42
miR319	24.04	79.79	0.96	26.90	70.15	1.68
miR390	149.46	139.54	40.5	7.16	71.46	87.82
miR393	2.67	5.14	23.32	3.48	3.72	10.27
miR394	1.15	10.19	16.21	3.20	22.53	30.66
miR395	11.91	0.25	0.08	1.12	0.06	0.08
miR396	563.33	188.83	704.53	88.43	179.79	633.29
miR397	0.57	53.17	75.22	7.25	0.03	0.09
miR398	0.07	27.89	67.94	2.04	0.34	0.07
miR399	18.12	599.61	211.9	45.82	100.41	80.46
miR408	33.50	60.58	123.61	48.92	0.06	0.23
miR827	31.98	539.2	601.69	42.61	3.11	10.36
miR1515	1.08	8.76	11.04	6.74	3.28	10.83
Known miRNA
miR157	13362.55	35645.71	125371.8	10349.34	17252.43	64147.90
miR2111	31.40	66.98	11.22	23.62	76.54	22.22
miR2911	7415.80	828.56	951.76	681.09	79.65	9.76
miR2916	3.46	15.84	15.07	141.81	42.53	70.68
miR2950	235.09	42.71	1.86	4.80	20.24	4.42
miR4414	0.00	389.65	3.28	0.00	221.73	117.57
miR530	8.30	50.72	7.27	24.32	53.19	154.16
miR858	0.02	0.04	0.02	0.01	0.12	0.24

The RPM (reads per million reads) value was used to represent the expression levels of cucumber miRNA