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. 2016 Oct 31;24(1):25–35. doi: 10.1093/dnares/dsw045

Figure 1.

Figure 1

DNA sequence dependent structural properties: AFE, DNase I sensitivity, NPP and curvature profiles for 1001 nucleotides long primary (gTSS) promoter sequences (extending from −500 to + 500 nucleotides with respect to TSS at 0). The black colour plots correspond to profiles of structural feature for shuffled sequences (upstream −500 to − 100, promoter region −80 to + 20 and downstream +100 to + 500 nucleotide position with respect to TSS at 0). The number of promoter sequences and whole genome GC% is mentioned along with the organism name, on the left of each row.