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. 2017 Apr 1;9(4):855–868. doi: 10.1093/gbe/evx052

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© The Author(s) 2017. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

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Fig. 4.— — Analysis of putative RNA editing events in P. confluens. RNA-seq data from three conditions were analyzed (Traeger et al. 2013). The occurrence of base changes in annotated genes compared with genomic DNA is given as putative RNA editing events per million covered bases, the coverage threshold was set to ≥5. Only base changes detected in two independent samples for each condition were counted. Abbreviations: DD, growth in darkness (P. confluens does not form fruiting bodies without light); vegmix, pooled RNA from growth in light but under conditions that do not allow fruiting body formation (submerged growth or growth on complete medium); sex, growth under conditions that allow fruiting body formation (surface cultures in minimal medium in the light).