Table 2.
Editing Sites in Replicate Experiments with Sordaria macrospora
| Normalized Number of Occurences for Putative Editing Event |
|||||||||
|---|---|---|---|---|---|---|---|---|---|
| AG | AG | AG | AG | All | All | All | All | ||
| Condition | Covered Basesa | Rep. 1 | Rep. 2 | Both | % Bothb | Rep. 1 | Rep. 2 | Both | % Bothb |
| veg | 14022957 | 84.1 | 80.6 | 12.9 | 15.7 | 549.2 | 1148.7 | 76.7 | 9.0 |
| sex | 12261402 | 92.3 | 62.2 | 8.5 | 11.0 | 730.5 | 1192.1 | 48.0 | 5.0 |
| wt proto | 4708650 | 556.5 | 336.9 | 103.2 | 23.1 | 1621.3 | 1336.5 | 283.1 | 19.1 |
| pro1 proto | 4469196 | 232.7 | 226.4 | 33.3 | 14.5 | 2008.2 | 2153.5 | 208.8 | 10.0 |
| nox1 proto | 6733663 | 266.6 | 233.4 | 32.5 | 13.0 | 1931.4 | 1611.5 | 177.0 | 10.0 |
The number of occurrences (normalized to million covered bases with coverage ≥5) for A-to-G base changes (AG) or all base changes is given for the two independent replicates (rep. 1 and rep. 2) and for base changes that were found in both replicates (both).
a
Mean of independent replicates 1 and 2.
b
Both as % of mean of independent replicates 1 and 2.