Table 3.
Species | miP candidates |
Excl. in metazoaa |
Excl. in all metazoa |
Excl. in plantsa |
Excl. in all plants |
In all species |
Total PRT | %b | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Total | %c | PPId | %b | PRT | GRP | PRT | GRP | PRT | GRP | PRT | GRP | PRT | GRP | |||
Arabidopsis thaliana | 1589 | 5 | 751 | 47 | 461 | 151 | 105 | 30 | 22 | 7 | 588 | 37 | ||||
Solanum lycopersicon | 4160 | 12 | 1399 | 34 | 1554 | 641 | 108 | 31 | 24 | 7 | 1686 | 41 | ||||
Solanum tuberosum | 6215 | 12 | 1784 | 29 | 1874 | 902 | 116 | 32 | 21 | 7 | 2011 | 32 | ||||
Sorghum bicolor | 1990 | 4 | 733 | 37 | 444 | 165 | 87 | 30 | 17 | 7 | 548 | 28 | ||||
Oryza sativa | 3447 | 7 | 945 | 27 | 678 | 299 | 103 | 30 | 29 | 7 | 810 | 23 | ||||
Zea mays | 10591 | 13 | 3315 | 31 | 2055 | 955 | 119 | 33 | 33 | 7 | 2207 | 21 | ||||
Homo sapiens | 2841 | 6 | 1107 | 39 | 530 | 161 | 14 | 3 | 15 | 7 | 559 | 20 | ||||
Mus musculus | 1209 | 4 | 681 | 56 | 358 | 132 | 8 | 4 | 16 | 7 | 382 | 32 | ||||
Danio rerio | 907 | 3 | 576 | 64 | 203 | 81 | 5 | 3 | 14 | 7 | 222 | 24 | ||||
Drosophila melanogaster | 567 | 2 | 235 | 41 | 73 | 24 | 8 | 3 | 22 | 7 | 103 | 18 | ||||
Caenorhapditis elegans | 1324 | 4 | 416 | 31 | 58 | 41 | 6 | 3 | 11 | 7 | 75 | 6 | ||||
total | 34840 | 11942 | 1222 | 439 | 41 | 16 | 7066 | 3113 | 638 | 186 | 224 | 77 | 9191 |
Exclusively in the specified group but not conserved among all.
Percentage of total microProtein candidate sequences (column “Total”).
Percentage of filtered sequences (table 2, column “Filtered”).
Sequences with annotated protein–protein interaction domain.
PRT, number of protein sequences; GRP, number of miP candidate families (groups).