Table 2.

Average Length, Gene Density, and GC Content of Scaffolds Harboring Putative Gene Models from Different Gene Families of Phytophthora megakarya and Phytophthora palmivora

Gene Family	P. megakarya				P. palmivora
	Average Scaffold Length		Gene Density (kb per gene)a	Average GC Content (%)	Average Scaffold Length	Gene Density (kb per gene)	Average GC Content (%)
Housekeeping
Amino acyl tRNA ligases	23,759		2.17	51.21	6,719	2.13	51.39
40s ribosomal proteins	14,803		2.17	50.99	9,198	2.00	50.71
Translation initiation factors	18,358		2.63	50.54	8,466	2.17	50.41
Elongation factors	21,475		2.38	50.07	6,466	2.04	51.29
General
Alcohol dehydrogenases	11,820		2.38	49.05	8,174	2.08	49.75
MFS transporters	15,585		2.56	48.80	7,284	2.44	49.50
Virulence-related
Pectinases	13,247		2.63	48.87	5,686	2.17	49.71
Proteases	13,219		2.38	48.84	8,359	2.33	49.32
Elicitins	14,216		2.13	48.79	7,777	2.22	50.28
CRNs	8,281		2.04	46.84	8,770	2.50	47.23
NPPs	6,917		2.22	45.58	9,458	2.63	47.49
RxLRs	8,917	2.49		44.62	10,032	2.68	46.34

^aDensity of all the PGeneMs in the scaffolds harboring one or more PGeneMs from different gene families. kb/gene is scaffold length (kb) divided by the number of genes per scaffold.