Fig. 2.—
Phylogenies of Gypsy-like retrotransposon sequences from Microbotryum strains. Phylogenies of Gypsy-like TE sequences from (A) MvD-Vinadio, (B) MvD-Sestriere, and (C) both genomes were reconstructed by maximum-likelihood. In (A) and (B), color indicates chromosome of origin. In (C), color indicates genome of origin. Green shading in (C) indicates MvD-Vinadio-specific clade. Outgroup is a Gypsy-like TE sequence from Microbotryum lychnidis-dioicae from the host plant Silene latifolia (MvSl). Branch support values are indicated in supplemental figure 1 (Supplementary Material online).