Table 2. Whole and regional genomic variances (Var), SNP names, and regional variance ratios, with LRT, on BTA14, BTA5, and BTA18.
| Trait 1) | Whole genomic Var | Regional genomic Var2) | First and last SNP names (pb)3) | R/(W+R) %4) | LRT | |
|---|---|---|---|---|---|---|
| BTA14 | MLK | 5009.6 | 240.9 | Hapmap30381-BTC-005750 (1463676) | 4.6 | 136.8 |
| Hapmap30086-BTC-002066 (2524432) | ||||||
| FAT | 485.6 | 42.7 | 8.1 | 210.9 | ||
| PRT | 393.2 | 6 | 1.5 | 33.7 | ||
| BTA5 | FAT | 543.9 | 27.2 | Hapmap48620-BTA-113306 (91799509) | 4.8 | 23.7 |
| Hapmap36414-SCAFFOLD150043_20489 (93567346) | ||||||
| BTA18 | PRT | 399.7 | 6.1 | BTA-97501-no-rs (57565406) | 1.5 | 15.6 |
| ARS-BFGL-NGS-118325 (60103953) |
1) MLK (milk), FAT(fat), and PRT(protein) yield in kg.
2) Regional variances were estimated by using a significant window (size 20) from each chromosome.
3) First and last SNP names and position of the window.
4) Percentages of regional genomic variance in the total genomic variance (whole and regional variances).