Table 1.

Descriptive features of GBS data generated with two methods of library construction

	Total	Library construction
		Conventional primers	Selective primers
Raw reads		191,912,978	163,583,652
Mapped reads		186,122,054	159,145,610
GBS variants		272,103	123,666
	Average call rate (n = 46)	0.352 [0.140–0.501]	0.159 [0.078–0.260]
	Common with SNP50	1604	756