Table 1. Putative functions of TFs in A. baumannii AB5075.

Shaded rows indicate genes required for A. baumannii infection of G. mellonella [12]. T3SS, Type III secretion system.

Protein ID	Family	Comment	Identity (E value)	Reference
ABUW_3565	AraC	Regulator of methylation damage in E. coli	32 % (2e−49)	[93]
ABUW_2370	ArsR	Involved in arsenic detoxification in E.coli	52 % (3e−30)	[94]
ABUW_3668	ArsR	Regulator of the ars operon in E. coli	59 % (4e−35)	[95]
ABUW_2198	Bhl	Nucleoid organization and regulation in E. coli	71 % (8e−46)	[96]
ABUW_2241	Bhl	Required for site-specific recombination system expression in E. coli	56 % (6e−40)	[42]
ABUW_3279	Bhl	Integration host factor (IhfA) in E. coli controlling type 1-fimbrial expression (fimA)	68 % (5e−47)	[43]
ABUW_2741	Crp	Regulator of genes involved in the production of exotoxin and secretion systems (T3SS) in P. aeruginosa	55 % (9e−83)	[44, 97]
ABUW_0001	DnaA	Regulates initiation of bacterial replication in E. coli	48 % (2e−159)	[98]
ABUW_1533	Fis	Homeostatic regulator of DNA topology in E. coli	59 % (8e−33)	[45, 46]
ABUW_3813	GntR	Regulator of genes involved in transport and catabolism of l-lactate in E. coli	48 % (4e−78)	[99, 100]
ABUW_2775	GntR	Repressor for utilization of vanillate in A. baylyi ADP1	84 % (6e−141)	[101]
ABUW_0075	GntR	Regulator of histidine utilization genes in Brucella abortus	31 % (7e−42)	[102]
ABUW_1848	IclR	Controls protocatechuate degradation in A. baylyi ADP1	82 % (3e−172)	[47, 48]
ABUW_2488	IclR	Regulation of pobA in response to B-hydroxybenzoate in A. baylyi ADP1	82 % (2e−170)	[103]
ABUW_0067	IclR	Repressor of an aromatic catabolic pathway in Pseudomonas putida	31 % (7e−32)	[104]
ABUW_1599	LysR	Involved in regulation of genes responsible for swarming in P. aeruginosa.	47 % (1e−77)	[105]
ABUW_1878	LysR	Repressor of benzoate catabolism in P. putida	39 % (6e−65)	[106]
ABUW_2709	LysR	Regulation of benzoate degradation in A. baylyi ADP1	65 % (2e−149)	[107, 108]
ABUW_2849	LysR	Inhibitor of DNA replication in E. coli	36 % (3e−34)	[109]
ABUW_3471	LysR	Regulation of 3-phenylpropionic acid catabolism in E. coli	43 % (1e−75)	[110]
ABUW_1016	LysR	Positive regulation of sulfate starvation inducible genes	52 % (2e−12)	[111–113]
ABUW_3615	LytTR	Regulator of alginate biosynthesis in P. aeruginosa	47 % (2e−78)	[53]
ABUW_3790	MarR	Leucine-responsive regulatory protein (Lrp) in E. coli	57 % (1e−59)	[114]
ABUW_2706	MerR	Regulator of copper export in E. coli	41 % (2e−42)	[115]
ABUW_3015	MerR	Positive regulation of slpA, resulting in excision of cryptic prophage (CP4–57) in E. coli	40 % (8e−04)	[116, 61]
ABUW_3665	MerR	Cadmium-induced regulator in P. aeruginosa	49 % (3e−36)	[117, 118]
ABUW_3653	NrdR	Regulator of ribonucleotide reductases operons in E. coli.	55 % (3e−64)	[54]
ABUW_2201	Rrf2	Regulator of iron–sulfur clusters in E. coli	54 % (2e−49)	[49]
ABUW_2970	TetR	Choline-responsive repressor in A. baylyi	81 % (9e−130)	[41]