TABLE 1.

Flavivirus strains used for production of whole viruses and recombinant proteins

Virusa	IDb	Isolate	Country	Yr	Host	GenBank accession no.
ZIKV
Asian lineage		H/PF/2013c	French Polynesia	2013	Human	KJ776791
	1	SV0127/14	Thailand	2014	Human	KU681081
	2	CPC-0740d	Philippines	2012	Human	KU681082
	3	VABC59	USA (Puerto Rico)	2015	Human	KU501215
	4	SPH2015	Brazil	2015	Human	KU321639
	5	YAPd	Micronesia	2007	Human	EU545988
African lineage	1	MR-766c,d	Uganda	1947	Macaca mulatta	KU955594
	2	IBH30656	Nigeria	1968	Human	HQ234500
	3	DAKAR41525	Senegal	1984	Aedes africanus	KU955591
	4	DAKAR 41662	Senegal	1984	A. africanus	KU955592
	5	ARB7701	Central Africa	1976	A. africanus	KF268950
	6	ArD_41519	Senegal	1984	A. africanus	HQ234501
DENV1		HAWAII	USA	1944	Human	KM204119
DENV2		NGC	New Guinea	1944	Human	KM204118
DENV3		H87	Philippines	1956	Human	M93130
DENV4		H241	Philippines	1956	Human	AY947539
WNV		NY99	USA	1999	Owl	NC_009942
YFV		17-D-204	USA	1985	Vaccine	JX503529
JEV		SA14-14-2	South Korea	2006	Vaccine	JN604986
SLEV		PARTON	USA	1933	Human	EF158070
MVEV		1-51	Australia	1952	Human	NC_000943
ROCV		SPH34675	Brazil	1975	Human	AY632542
POWV		LB	Canada	1958	Human	NC_003687
TBEV-E		SOFJIN-HO	Russia	1937	Human	AB062064
TBEV-EUR		NEUDOERFL	Austria	1971	Ixodes ricinus	NC_001672

^aVirus abbreviations: ZIKV, Zika virus; DENV, dengue virus; WNV, West Nile virus; YFV, yellow fever virus; JEV, Japanese encephalitis virus; SLEV, St. Louis encephalitis virus; MVEV, Murray Valley encephalitis virus; ROCV, Rocio virus; POWV, Powassan virus; TBEV-E, tick-borne encephalitis virus, Eastern strain; TBEV-EUR, tick-borne encephalitis virus, European strain.

^bThe identification (ID) number corresponds to the ZIKV strain labels shown in Fig. 2A and B.

^cUsed for challenge of M. mulatta.

^dRepresentative antigens are shown in Fig. 2C to 4 and Fig. S2 to S4 (virus for CPC-0740; E protein for YAP).