Table 2.
Genotype counts and minor allele frequencies for the three associated loci
| Genotype counts cases | Genotype counts controls | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SNP | CHR | BP | Minor Allele (a) | Major Allele (A) | aa | aA | AA | MAF | aa | aA | AA | MAF |
| rs10937625 | 4 | 5 128 159 | C | T | 113 | 942 | 1622 | 0.2182 | 403 | 2492 | 3410 | 0.2615 |
| rs17590046 | 4 | 24 362 541 | C | T | 68 | 775 | 1888 | 0.1668 | 263 | 2112 | 4047 | 0.2054 |
| rs12764057 | 10 | 68 845 715 | G | T | 485 | 1283 | 930 | 0.4175 | 898 | 2974 | 2537 | 0.3721 |
| rs10822974 | 10 | 68 850 419 | G | A | 625 | 1271 | 637 | 0.4976 | 1827 | 3116 | 1312 | 0.5412 |
| rs7903491 | 10 | 68 917 164 | A | G | 453 | 1311 | 881 | 0.4191 | 1347 | 3208 | 1848 | 0.4609 |
MAF = minor allele frequency; SNP = dbSNP ID of the marker; CHR = chromosome; BP = chromosomal position (GRCh37).