Table 4. Differential expression of putative ATP-Binding Cassette (ABC) transporters in Carausius excretory tissues.
Category | Total | AoM | MpgT | MgWall | AoM + MpgT | MpgT + MGWall | AoM + MgWall |
---|---|---|---|---|---|---|---|
ABC[#] | 2 | 1 | |||||
ABCA1 | 4 | 2 | |||||
ABCA2 | 1 | 1 | |||||
ABCA3 | 13 | 4 | 2 | 4 | 1 | ||
ABCB10 | 2 | ||||||
ABCB6 | 2 | 1 | |||||
ABCB7 | 1 | ||||||
ABCB8 | 2 | 1 | |||||
ABCC11 | 1 | ||||||
ABCC8 | 1 | ||||||
ABCC-MRP[#] | 55 | 7 | 33 | 3 | 1 | 4 | |
ABCC-MRP1 | 36 | 7 | 18 | 1 | 2 | 5 | |
ABCC-MRP3 | 2 | 1 | 1 | ||||
ABCC-MRP4 | 10 | 1 | 3 | 3 | |||
ABCC-MRP49 | 7 | 3 | 3 | 1 | |||
ABCC-MRP5 | 7 | ||||||
ABCC-MRP7 | 2 | 1 | |||||
ABCD2 | 1 | ||||||
ABCD3 | 3 | 2 | |||||
ABCE1 | 2 | ||||||
ABCF1 | 1 | ||||||
ABCF2 | 2 | ||||||
ABCF3 | 1 | ||||||
ABCG1 | 4 | 3 | |||||
ABCG14 | 1 | 1 | |||||
ABCG20 | 4 | 3 | |||||
ABCG23 | 3 | 2 | |||||
ABCG4 | 13 | 5 | 1 | 1 | 1 | 2 | |
ABCG5 | 3 | 3 | |||||
ABCG8 | 1 | 1 |
ABC transporters were identified with a profile hidden Markov model search [41] of the transcriptome with an ABC transporter PFAM domain query [42]. ABC transporter names are given with subfamily letter and subgroup number when identifiable. Values are the number of total sequences per subcategory in the transcriptome, and the number differentially expressed in each tissue or possible tissue pair. None of these sequences were highly expressed. For the full list, see S3 Table. AoM = Appendices of the Midgut, MGWall = Midgut Wall, MpgT = Malpighian tubules. MRP = multidtrug resistance protein.