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. 2017 Apr 6;12(4):e0175116. doi: 10.1371/journal.pone.0175116

Table 5. Genes coding for proteins involved in acid stress and bile salt resistance.

Locus_tag EC Number Gene Product Stress response
NCDO2118_1870 - atpC ATP synthase epsilon chain Acid stress
NCDO2118_1871 3.6.3.14 atpD ATP synthase subunit beta Acid stress
NCDO2118_1872 - atpG ATP synthase gamma chain Acid stress
NCDO2118_1873 3.6.3.14 atpA ATP synthase subunit alpha Acid stress
NCDO2118_1874 - atpH ATP synthase subunit delta Acid stress
NCDO2118_1875 - atpF ATP synthase subunit b Acid stress
NCDO2118_1876 - atpB ATP synthase subunit a Acid stress
NCDO2118_1877 - atpE ATP synthase subunit C Acid stress
NCDO2118_1384 1.1.1.27 ldh L-lactate dehydrogenase Acid stress
NCDO2118_0475 - ptcC PTS system, cellobiose-specific IIC component Acid stress
NCDO2118_0542 1.2.1.12 gapA Glyceraldehyde-3-phosphate dehydrogenase Acid stress
NCDO2118_0399 5.4.2.11 gpmA 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase Acid stress/bile resistance
NCDO2118_2272 5.3.1.9 pgi Glucose-6-phosphate isomerase Acid stress
NCDO2118_0096 2.7.1.40 pyk1 Pyruvate kinase Acid stress
NCDO2118_1385 2.7.1.40 pyk2 Pyruvate kinase Acid stress
NCDO2118_0240 2.7.2.3 pgk Phosphoglycerate kinase Acid stress/bile resistance
NCDO2118_0417 - recA1 Protein RecA Acid stress
NCDO2118_1251 - recA2 Protein RecA Acid stress
NCDO2118_0540 - clpE ATP-dependent Clp protease ATP-binding subunit Acid stress
NCDO2118_0453 - groL 60 kDa chaperonin Acid stress
NCDO2118_1545 - clpB Chaperone protein Acid stress
NCDO2118_0467 1.15.1.1 sodA Superoxide dismutase Acid stress
NCDO2118_0073 2.7.6.5 relA GTP pyrophosphokinase Acid stress
NCDO2118_0637 4.2.1.11 eno Enolase Acid stress/bile resistance
NCDO2118_1019 - dnaK Chaperone protein Acid stress/bile resistance
NCDO2118_1594 3.5.99.6 nagB Glucosamine-6-phosphate deaminase/isomerase Bile resistance
NCDO2118_1909 3.4.24.- pepO Endopeptidase O Bile resistance
NCDO2118_0941 5.4.99.9 glf UDP-galactopyranose mutase Bile resistance
NCDO2118_0500 6.3.4.2 pyrG CTP synthase Bile resistance
NCDO2118_0035 1.8.1.4 pdhd Pyruvate dehydrogenase Bile resistance
NCDO2118_2145 6.1.1.19 argS Arginyl-tRNA synthetase Bile resistance
NCDO2118_1958 - oppA Oligopeptide-binding protein Bile resistance
NCDO2118_2203 - rpsC 30S ribosomal protein S3 Bile resistance
NCDO2118_2191 - rpsE 30S ribosomal protein S5 Bile resistance
NCDO2118_2208 - rplD 50S ribosomal protein L4 Bile resistance
NCDO2118_2197 - rplE 50S ribosomal protein L5 Bile resistance
NCDO2118_2193 - rplF 50S ribosomal protein L6 Bile resistance