Table 2.
Comparison of execution times (in seconds) for different dataset sizes (Fomat: D-number of sequences-number of SNPs) on a single processing core [69]
D-102–104 | D-102–105 | D-103–104 | D-103–104 | |
---|---|---|---|---|
SweepFinder | 540 (1×) | 4138 (1×) | 132,938 (1×) | 135,996 (1×) |
SweeD | 125 (4.3×) | 1169 (3.5×) | 283 (469×) | 1345 (101×) |
OmegaPlus | 6 (90×) | 652 (6.4×) | 7 (18,991×) | 753 (180×) |