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. 2017 Mar 26;2017:5393268. doi: 10.1155/2017/5393268

Table 1.

Reads genome alignment statistics.

Class ASCs NSCs
Number % Number %
Total reads 16816796 17474976
Total mappeda reads 15729752 93.54 16415908 93.94
 Total HQ mapped reads 13005381 82.68 13137926 80.03
  Promoter (≤1 kb) 90241 0.69 84170 0.64
  Promoter (1-2 kb) 81955 0.63 79542 0.61
  1st exon 20000 0.15 17909 0.14
  Other exons 458938 3.53 430799 3.28
  1st intron 625989 4.82 610668 4.65
  Other introns 2953913 22.72 2887216 21.99
  3′ UTR 91283 0.70 87248 0.66
  5′ UTR 9569 0.07 9244 0.07
  Distal intergenic regions 8463689 65.10 8722453 66.43
  Downstream (≤3 kb) 204583 1.57 200206 1.52
  In CpGb islands 97569 0.62 79283 0.48

aReads were mapped by BWA database with the default parameter.

bCpG islands were downloaded from UCSC database.

ASCs: activated Schwann cells; NSCs: normal Schwann cells; HQ: high quality.