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Number of C nucleotides and CpG sites analyzed in various HERV-K(HML-2) 5′ LTR sequences employing bisulfite genomic sequencinga
| Provirus | Total C in LTR | Total C analyzed | Total CpG in LTR | Total CpG analyzed |
|---|---|---|---|---|
| LTR-c7L | 240 | 106 | 19 | 9 |
| LTR-c6 | 235 | 101 | 17 | 7 |
| LTR-c11 | 234 | 104 | 17 | 9 |
| LTR-c5 | 230 | 100 | 11 | 5 |
| LTR-c12 | 227 | 95 | 15 | 7 |
Total numbers of C and CpG and respective sites analyzed within the various proviral 5′ LTRs are listed. The proviruses are detailed in Table 1.
