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. 2017 Mar 14;29(3):461–473. doi: 10.1105/tpc.16.00831

Table 2. De Novo Transcriptome Assembly Statistics.

Species Raw Reads Clean Reads Word Size Contigs N50
S. moellendorffii 63,151,678 56,711,459 40 (Single) 44,564 584
S. martensii 90,146,302 82,241,287 40 (Paired) 51,848 557
S. kraussiana 145,585,252 135,198,965 60 (Paired) 44,996 780
I. drummondii 103,198,884 68,341,138 60 (Paired) 264,900 427

The number of contigs, number of raw and clean reads, the word size used to generate each assembly, and the N50 statistic (summary of the lengths of the longest contigs until 50% of the total contig length is reached) are shown.