Table 1. Summary of SSR and SNP marker availability and genotyping results for linkage mapping in the GRYG, CNJ02, and CNJ04 cranberry populations following marker filtering steps and merging with previous marker datasets.

Population	# of SNPs in HapMap	# SNPs After Filtering for Missing Dataa	# SNPs After Filtering for MAFb	# SNPs After Filtering for SDc	# SSRs	Total # of Mappable Markers
GRYG	18,499d	18,374	8345	5150	189d	5339
CNJ02	15,197	15,028	8721	5564	629e	6193
CNJ04	15,224	14,818	8566	4566	221	4787

^aSNP loci with >20% missing data were excluded.

^bSNP loci with a MAF <10% were excluded.

^cSNP loci with extreme segregation distortion were excluded.

^dGenerated in Covarrubias-Pazaran et al. (2016).

^eGenerated in Schlautman (2015a).