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. 2017 Feb 28;7(4):1239–1249. doi: 10.1534/g3.116.037218

Table 1. The number of unique p-sites and phosphoproteins identified in the various phosphorylation compendiums and subsets.

Total p-Sites Total p-Sites Found in PFAM Domains Highly Confident p-Sites Highly Confident p-Sites Found in PFAM Domains Phosphoproteins Phosphoproteins with Highly Confident p-Sites
12UHQ 9783 2059 2566 (26%) 431 2374 1112 (47%)
20UHQ (only HTP) 13,244 2625 4156 (31%) 698 2587 1421 (55%)
21UHQ (including PG2) 14,339 3036 5519 (38%) 1175 2633 1557 (59%)
21UHQ metabolism (including PG2) 1668 527 499 99 412 197
21UHQ metabolism essential proteins (including PG2) 339 153 79 34 71 36

p-sites identified in three or more experiments are designated as Highly Confident. 12UHQ refers to the Amoutzias et al. (2012) dataset. 20UHQ (only HTP) refers to the p-sites identified by 20 HTP experiments in Vlastaridis et al. (2017). 21UHQ (including PG2) refers to the p-sites identified by 20 HTP experiments and by PhosphoGrid2 in Vlastaridis et al. (2017). 21UHQ metabolism (including PG2) refers to the p-sites identified by 20 HTP experiments and by PhosphoGrid2 in Vlastaridis et al. (2017) that were in metabolic proteins. 21UHQ metabolism essential proteins (including PG2) refers to p-sites identified by 20 HTP experiments and by PhosphoGrid2 in Vlastaridis et al. (2017) that were in essential metabolic proteins. p-site, phosphorylation site; HTP, high-throughput.