Table 1. Variants detected by whole genome resequencing of two cases, two obligate carriers, and 75 controls.
Filtering Step | Number of Variants |
---|---|
Variants with genotypes 1/1 in cases and 0/1 in carriers | 53,683 |
NFS-associated variants in whole genomea | 351 |
NFS-associated variants in critical interval on chr. 27a | 0 |
NFS-associated variants in critical interval on chr. 7a | 4 |
NFS-associated nonsynonymous variants in critical intervalsa | 1 |
“NFS-associated” indicates variants that were homozygous for the alternate allele in the two cases, heterozygous in the two carriers, and homozygous reference (or missing) in the 75 control horses.