Table 3.
Gene | Primer sequence | Primer concentration [nM] | Ta [°C] | Amplicon length [bp] | No. of CpGs analyzed | Chromosome, position of sequence to analyze, DNA strand | Reference |
---|---|---|---|---|---|---|---|
ESR2 | f: 5′ GGAGGTTGAGAGAAATAATTGTTTTTTGA 3′ | 400 | 61 | 255 | 9 | 14, [49,292- 49,369], positive strand |
in-house [NG_011535.1] |
r: 5′ [Btn]ATAAACACACCCACCTTACCTTCTCTA 3′ s: 5′ GAAATAATTGTTTTTTGAAATTTG 3′ |
f forward primer, r reverse primer, s sequencing primer, [Btn] biotin, T a annealing temperature