Table 3. Summary of differential expression analysis.
| Expression detected only in pcnB | Expression detected only in wt | Top 5 upregulated | log2 fold-change | Top 5 down-regulated | log2 fold-change |
|---|---|---|---|---|---|
| sdsR | rydC | yjiY | 4.76 | grcA | -3.98 |
| micF | rprA | ryjA | 3.84 | pcnB | -3.96 |
| ohsC | rdlD | tsgA | 3.74 | nanC | -3.57 |
| arrS | agrB | 3.73 | ydhL | -3.33 | |
| sokA | glmS | 3.25 | fhuD | -3.32 |
Genes the expression of which was detected in only one of the strain together with the five most up-regulated and down-regulated genes in pcnB deficient mutant (positive log2 fold-change indicates a higher expression in the pcnB strain).