Table 1. Predictions of non-TCGA datasets using the SVM model trained with the binarized miRNA arm profiles of the TCGA tumor samples.
Accession number | Platform | Cancer type | Samples correctly classified (%) |
---|---|---|---|
GSE35834 | Affymetrix miRNA Array | COAD | 26 (84%) |
GSE36802 | Affymetrix miRNA Array | PRAD | 16 (76%) |
GSE53159 | Affymetrix miRNA Array | COAD | 29 (91%) |
GSE67138 | Affymetrix miRNA Array | LIHC | 52 (91%) |
GSE67139 | Affymetrix miRNA Array | LIHC | 110 (96%) |
SRP034550 | ABI SOLiD sequencing | PRAD | 5 (100%) |
SRP034557 | ABI SOLiD sequencing | BRCA | 2 (100%) |