Table 1. The names, abbreviations, original publications and Short Read Archive run accessions of the datasets used in this analysis.
| Dataset | Abbreviation | Source | SRR accession |
|---|---|---|---|
| Human HEK293 cells | HEK293 | (16) | SRR2433794 |
| Human HEK293 cells | HEK293-Gao | (18) | SRR1630831 |
| Mouse liver cells | M. Liver | (18) | SRR1630812 |
| Mouse endoplasmic fibroblasts | M. EF | (18) | SRR1630816 |
| C. elegans, Dauer 0 h | 0 h | unpublished | SRR5026356 |
| C. elegans, Dauer-exit 0.5 h | 0.5 h | unpublished | SRR5026359 |
| C. elegans, Dauer-exit 1 h | 1 h | unpublished | SRR5026589 |
| C. elegans, Dauer-exit 2 h | 2 h | unpublished | SRR5026592 |
| C. elegans, Dauer-exit 3 h | 3 h | unpublished | SRR5026603 |
| C. elegans, Dauer-exit 4 h | 4 h | unpublished | SRR5026637 |
| C. elegans (aggregate) | C. elegans | unpublished |