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. 2017 Jan 18;45(5):2629–2643. doi: 10.1093/nar/gkx006

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© The Author(s) 2017. Published by Oxford University Press on behalf of Nucleic Acids Research.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com

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Figure 5. — Pfam domain content in different annotation sets compared to reference species. The percentage of proteins with Pfam domains in M. sympodialis annotation was calculated using the total number of genes after manual curation as denominator. The numbers of M. sympodialis proteins with Pfam domains identified from different annotations sets were 2595 in the Gioti annotation (MAKER with homology evidence) (5), 2647 in MAKER annotation with homology and RNA-seq evidence, 2903 in MAKER annotation with homology, RNA-seq and peptide evidence, and 3173 after manual annotation.