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. 2017 Jan 18;45(5):2629–2643. doi: 10.1093/nar/gkx006

Table 1. M. sympodialis nuclear chromosome sizes and predicted centromeres.

Chr Size in current assembly (bp) Size estimate from PFGE (Mb) Putative centromeric region (CEN) GC content of 250 bp trough Size of CEN (bp)
1 1 508 930 1.55 786 541–787 061 16.4% 520
2 1 381 175 1.37 355 760–355 841 20.0% 81
3 1 353 702 1.37 237 534–238 686 15.6% 1152
4 1 203 350 1.17 418 202–418 728 15.2% 526
5 709 412 0.75 125 056–125 220 18.0% 164
6 634 681 0.62 101 950–102 502 14.4% 552
7 517 958 0.53 431 542–431 987 13.2% 445
8 438 251 0.47 24 694–25 564 18.4% 870
Total 7 747 459 7.83 n.a. n.a. 4310

The PFGE karyotyping and corresponding chromosome size estimates have been described previously (6,66). Note that bands for chromosome 2 and 3 overlapped in the PFGE gel. n.a., not applicable.