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. 2016 Nov 28;45(5):e30. doi: 10.1093/nar/gkw1063

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© The Author(s) 2016. Published by Oxford University Press on behalf of Nucleic Acids Research.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

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Figure 7. — Accuracy of log-FCs estimated by differential expression methods. Gene-wise log-FCs estimated by the different methods are plotted on the x-axis against predicted log-FCs obtained from the non-linear model on the y-axis. Areas with high density of points are shaded in blue, where colour intensity reflects the density of points. Red lines mark equality between estimated and predicted log-FCs. Root-mean-square error (RMSE, Equation 3) between estimated and predicted log-FCs are displayed in each panel.