. 2017 Feb 17;45(6):2937–2950. doi: 10.1093/nar/gkx108

Table 1. Oligonucleotides used in this work. Underlined sequences indicate the three central binding sites.

Name	Sequence
Ccd1	5΄-`ACGTACCTTCCTCTTTATGTATACCCGGCAGGACTGGAAATA`-3΄
	3΄-`TGCATGGAAGGAGAAATACATATGGGCCGTCCTGACCTTTAT`-5΄
Ccd2	5΄-`ACGTACCTTCATATATACTGATATGTATACCCGCTGGAAATA`-3΄
	3΄-`TGCATGGAAGTATATATGACTATACATATGGGCGACCTTTAT`-5΄
Ccd3	5΄-`ACGTGCGGTATAAGAATATATACTGATATGTATACCCGAATA`-3΄
	3΄-`TGCACGCCATATTCTTATATATGACTATACATATGGGCTTAT`-5΄
Random	5΄-`TGCCCAAGTGATGCTAAACAAGACTTAGCTGGTTCCTGTGTT`-3΄
	3΄-`ACGGGTTCACTACGATTTGTTCTGAATCGACCAAGGACACAA`-5΄
Full length	5΄-`CAGTATGCGTATTTGCGCGCTGATTTTTGCGGTATAAGAATATATACT`
	3΄-`GTCATACGCATAAACGCGCGACTAAAAACGCCATATTCTTATATATGA`
	`GATATGTATACCCGAAGTATGTCAAAAAGAGGTGTGCTATGAAGCAGCGTA`
	`CTATACATATGGGCTTCATACAGTTTTTCTCCACACGATACTTCGTCGCAT`
	`TTACAGTGACAGTT`-3΄
	`AATGTCACTGTCAA`-5΄
CcdITC	5΄-`GCGGTATAAGAATATATACTGATATGTATACCC`-3΄
	3΄-`CGCCATATTCTTATATATGACTATACATATGGG`-5΄