Table 1. Association between SNPs in the SLCO1B1 gene and CYP4 cluster and hexadecanedioate levels in the meta analysis carried out by Shin et al (2014)[7], in the extremes of BP carried out by Padmanabhan et al (2010)[11], in the ICBP consortium GWAS(2011)[10] and with risk of statin associated myopathy as reported (SEARCH collaborative group 2008)[14].
Gene | SNP | EA | hexadecanedioate-TUK KORA meta-analysis Nat Gen | HTN extreme GWAS | ICBP | Risk of statin associated myopathy | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BETA | SE | P | BETA | SE | P | BETA | SE | P | BETA | SE | P | |||
SLCO1B1 | rs4149056 | T | -0.088 | 0.006 | 1.65x10-51 | -0.006 | 0.031 | 0.86 | -0.12 | 0.13 | 0.34* | -1.51 | 0.258 | 4.0x10-9 |
rs2900478 | A | 0.087 | 0.006 | 2.02x10-50 | 0.022 | 0.029 | 0.50 | |||||||
rs7969341 | A | -0.086 | 0.006 | 2.67x10-49 | -0.022 | 0.029 | 0.50 | |||||||
rs4363657 | T | -0.085 | 0.006 | 3.92x10-48 | -0.022 | 0.029 | 0.49 | -1.51 | 0.258 | 4.0x10-9 | ||||
rs4149081 | A | 0.084 | 0.006 | 9.67x10-48 | 0.021 | 0.029 | 0.50 | |||||||
rs11045879 | T | -0.084 | 0.006 | 1.56x10-47 | -0.022 | 0.029 | 0.49 | |||||||
rs2199680 | A | -0.084 | 0.006 | 4.52x10-47 | -0.018 | 0.029 | 0.57 | |||||||
rs12366582 | A | -0.083 | 0.006 | 2.28x10-46 | -0.019 | 0.029 | 0.55 | |||||||
rs12369881 | A | 0.083 | 0.006 | 2.28x10-46 | 0.019 | 0.029 | 0.54 | |||||||
rs12371604 | T | -0.069 | 0.005 | 2.85x10-42 | -0.002 | 0.026 | 0.96 | |||||||
rs4149054 | A | 0.054 | 0.005 | 6.26x10-26 | 0.027 | 0.027 | 0.37 | |||||||
rs4149050 | T | -0.052 | 0.005 | 1.23x10-24 | -0.027 | 0.027 | 0.37 | |||||||
rs4149058 | A | -0.052 | 0.005 | 2.06x10-24 | -0.026 | 0.027 | 0.37 | |||||||
rs4149057 | T | 0.039 | 0.004 | 2.00x10-19 | 0.023 | 0.023 | 0.36 | |||||||
rs11045656 | A | 0.026 | 0.004 | 5.39x10-9 | 0.064 | 0.025 | 0.02 | |||||||
CYP4 | rs6663731 | A | 0.045 | 0.007 | 5.49x10-11 | 0.067 | 0.035 | 0.08 | -0.041 | 0.147 | 0.92 | |||
rs9332998 | T | 0.04 | 0.007 | 4.19x10-9 | 0.068 | 0.036 | 0.08 | -0.002 | 0.148 | 0.99 |
* Beta(SE), P Value for SNP rs12317268 that is in complete LD (R2 = 1) with rs4149056