Table 1.
Long Interspersed Nuclear Element clades found in the A. carolinensis genome.
| Clades | Number of families | Number of RT hits1 | Total number of copies in published genome1 | Number of full-length copies in published genome1 | Length of full length elements1 | Number of polymorphic insertions2 | Number of full-length polymorphic insertions2 |
|---|---|---|---|---|---|---|---|
| R4 | 2 | 7,682 | 3,000 | 994 | 3.8 Kb | 1,729 | 712 |
| RTE | 2 | 18,554 | 3,516 | 217 | 3.2–3.9 Kb | 3,367 | 1782 |
| CR1 | 4 | 86,802 | 1,594 | 117 | 4.6–5.8 Kb | 27,802 | 2,578 |
| L2 | 17 | 38,607 | 3,800 | 380 | 4.8–6.3 Kb | 11,210 | 769 |
| L1 | 20 | 7,441 | 806 | 170 | 5.2–6.8 Kb | 2,508 | 1,089 |
1Data from Novick et al. (2009); 2This study.