Table 3.
Genome sequence information and statistics of the atypical strains of X. arboricola strains CITA 14 and CITA 124, isolated from Prunus.
| Property/Attribute | CITA 14 | CITA 124 |
|---|---|---|
| Value | Value | |
| Sequencing platform | Ion Torrent PGM | Ion Torrent PGM |
| Fold coverage | 100x | 50x |
| Assemblers | CLC and MIRA 4.0 | CLC and MIRA 4.0 |
| Genome annotation | NCBI-PGAP | NCBI-PGAP |
| Locus tag | A7D01 | A7D35 |
| Genbank ID | LXIB00000000 | LXKK00000000 |
| Genome size (bp) | 4,864,444 | 4,752,241 |
| DNA G+C (%) | 65.60 | 65.80 |
| Total genes | 4,061 | 4,086 |
| Protein coding genes | 3,870 | 3,798 |
| RNA genes | 87 | 82 |
| Pseudo genes | 104 | 206 |
| Genes with function prediction | 2,991 | 2,838 |
| Genes assigned to COGs | 3,090 | 2,668 |
| Genes with Pfam domains | 3,320 | 2,668 |
| Genes with signal peptides | 625 | 569 |
| Genes with transmembrane helices | 942 | 954 |
| CRISPR repeat unit | 1 | 0 |
CITA, Centro de Investigación y Tecnología Agroalimentaria de Aragón, Zaragoza, Spain.