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. 2017 Apr 13;8:579. doi: 10.3389/fpls.2017.00579

Table 3.

Amplification statistics for one Ferritin-1, one BHLH-1, one IRT-1 gene specific primer pairs, and one primer pair for each reference gene (GADPH, Actin).

Gene Forward sequence Reverse sequence Tm (°C) Size (bp) Slope R2 E Reference
Ferritin-1 AGATATCCGAGTATGTTGCTCAG AAGATGCACGAATGAAGCAGAAA 61 84 –3.32 0.9968 100.07 Current work
IRT-1 GTCGCTGTTTTGCTAGGTGC GTGAGCTTCTCCTCTTCCCT 61 159 –3.12 0.9954 109.18 Current work
BHLH-1 TTATTAGGGTTAGACTCAACGCA TTGCGATCTTTGGTTCCCA 59 74 –0.02 0.0034 6.55e+42 Sen Gupta et al., 2016
GADPH TGGGCGAAAACTCCACTTTG GAATTGCTGCAGCCTTGTGA 60 57 –3.15 0.9954 107.71 Saha and Vandemark, 2012
Actin CCAAATCATGTTTGAGGCTTTTAA GTGAAAGAACGGCCTGAATAGC 60 64 –3.55 0.9972 91.25 Saha and Vandemark, 2012

Here, Tm = melting temperature, Size = amplicon length, Slope = slope of the trend line in amplification efficiency graph, R2= regression coefficient, E = amplification efficiency.