Skip to main content
. 2017 Apr 13;12(4):e0174842. doi: 10.1371/journal.pone.0174842

Table 4. Sequence information.

Marker (Codon Pos.) T(U) C A G A/T Parsimony informative
(PI) sites/Total sites
% PI sites
Folmer (all sites) 33,8 17,6 31,6 17 65,4 213/541 39,4
CO1B (all sites) 36 16,7 32,3 14,9 68,3 245/508 48,2
ND1 (all sites) 47,3 11,3 26 15,4 73,3 172/335 51,3
Folmer (1st pos.) 36 8,7 50,5 4,8 86,5 39/180 21,7
CO1B (1st pos.) 35,2 19,9 26,5 18,4 61,7 111/169 65,7
ND1 (1st pos.) 57,4 4,3 27,6 10,6 85 47/112 42.0
Folmer (2st pos.) 21,4 17,9 29,6 31,1 51 6/180 3,3
CO1B (2st pos.) 39,8 17,7 32,2 10,3 72 44/170 25,9
ND1 (2st pos.) 37,7 13,8 27,2 21,3 64,9 25/112 22,3
Folmer (3st pos.) 44 26,2 14,5 15,3 58,5 168/181 92,8
CO1B (3st pos.) 33 12,5 38,4 16,1 71,4 90/170 52,9
ND1 (3st pos.) 46,6 15,8 23,2 14,4 61 100/112 89,3

The proportion of each base (%) at all sites and at only 1st, 2nd and 3rd codon positions is shown for the three analysed mitochondrial gene partitions. The percentage of Parsimony informative (PI) sites is listed for all sites and for 1st, 2nd and 3rd codon positions separately. The value was determined by dividing the number of PI sites to the total numbers of basepairs (Total sites).