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. 2017 Mar 27;114(15):3909–3914. doi: 10.1073/pnas.1614664114

Table S2.

Oligonucleotides and siRNAs used in this study

GenesID Forward Reverse
Oligonucleotides for expression studies
 36b4 GTCACTGTGCCAGCCCAGAA TCAATGGTGCCCCTGGAGAT
 KDM1A ACCACAACAGACCCAGAAGG CTCGGTGGACAAGCACAGTA
 ESRRA CAAGCGCCTCTGCCTGGTCT ACTCGATGCTCCCCTGGATG
 ONECUT2 AAATCTGGCAGGGAGACCTT GGTTCTTGCTCTTTGCGTTT
 ZNF768 GGGTACCTCAGAGGCAACAT GGGTTCAAACTCTGGGCTTT
 GRWD1 TGGTCACCGACTGAGAACAC GCTCCAGCTGATGACATTGA
 RPIA TAGTCGCTTCATCGTGATCG GATTCCCTTGTGCCACTGAT
 RSAD1 CGCAGCTGAGATGTACCAGA AACGCCAAGGTACTGACCAC
 ANKRD13B GGCAAGGTCAAAGGCTGTAA GTGATCAGGGTCCCATTTTG
 LEF1 TGGAAAACGAAGCTCATTCC GGGTTGGCAGTGATTGTCTT
 TMEM198 GTGCTGTTTGTTTGGAGTCG TCTCGGTAGCAGAGGAGGAA
 BSN CCAGCCAAACTTCAACACCT AGCCCTCTGCATCTGACAGT
 OXNAD1 CAGCAGCTAAGGTGTGTGGA AACCCACCAACCACAGAGAC
 ABCF1 CAGTGCCAACCAGTGATGAG GGCAGGCTTAGGAGGATGTT
 SNX12 CCGAGGAGATGAAGGGATCT TGTAGGCAGCGTTCATTCTG
 ELK3 CCAAAGGCTTGGAAATCTCA CGGAGTCAGAAGCAATCCAT
 CFDP1 GTTCCTTCAGCTCTGCCATC TGAAGCTCTCCCAGTCCAGT
 TM9SF4 CCAGAACGATCCCGTAGAAA TCTCAGCACCTCTCCCAGAT
 NDUFB2 ACTGCTGGAGATGGTGGAGT CACATGAGTCCGCTGAAGAA
 SLC22A18 GTGGATCCCTGGCTTAGTGA ACAGCTTGGGTTGTGGTGAG
 GPR124 CTGGAGAAGCTGGACCTGAG AAGGTCTCGGAGGTGAGACA
 ATP2A3 TTGCACGAGTTCACCATCTC TAGTCCAGAGCCGAGTCGTT
 IRS2 AGACGCTCAGCACTGTTTCA AACAAGGGAAAGAGGCAGGT
 CLIC4 CCTTTTCCCAGAGGCTCTTC CTGGCTTCCTTTTCAGGTCA
 ACLY TGCCGACTACATCTGCAAAG GGTTCAGCAAGGTCAGCTTC
 NEK7 TGGATGAGCAATCACAAGGA TAGCCCATATCCGGTCGTAA
 UHMK1 TGGCCTGCAGAGTGATACAG AGCAGAACTGTTTGCCTTCC
 NCOR1 CGGAGTCCCTGATTATCGTT TCTTGAGGCCTGTCAGAACC
 MMP1 AGGTCTCTGAGGGTCAAGCA CTGGTTGAAAAGCATGAGCA
 MMP11 ATGATCGACTTCGCCAGGTA ATCCCCTTCTCGGTGAGTCT
 MMP14 GCAGAAGTTTTACGGCTTGC TAGCGCTTCCTTCGAACATT
Oligonucleotides for ChIP on TSS
 ONECUT2 GCCCTGATGGACTGAATGAA GTGCCCAGACTTTCCATTGT
 ZNF768 TTCTTCCTCAGGCTTTGGAG CAGCAACAGCAAAGCACTTC
 GRWD1 GATTAGCGGTCCCAGGAGTT CTGCTGACACCCGGTAAGAG
 RPIA CGGAGAGCATTATGGGATTG GGGTCTTGCTGGGAAATGTA
 RSAD1 AGTTCTGAGCCAGGCACATC CCTCCTGTCGGTTCTTTCC
 ANKRD13B TCCTCTCTCCCCATCATCC GGTCCCCACAGCTGCATA
 LEF1 ACACACCCCAAAACCAAGAC GAAGGAGGTGGTGATTGAGG
 TMEM198 GGGTTGGCAGTGATTGTCTT TCTGCTCCTGACGTCACTC
 BSN CAGAGGCCGCTTCTAGTGG CGCGGTTGTATCATGCTG
 OXNAD1 TGGAGATGGCTGAACTAGGG GCGAGCCCCACATTCTATT
 ABCF1 AGGCTTCCCAGACAGTCGTA GAGCTTCGCCGTCATCTC
 SNX12 TGTGCTGCTAGGCAGGGTAT GAGTGGAGGCCATATTCAGG
 ELK3 GGCGGAAAAGCCTGTTTA GAGCAGGAAGTTGGAGCAGT
 MMP1 AGGAATCCATAAGGGGAGGA CGGTGTCACCAGTGCTATCT
 SLC22A18 TTCCCACATTCCCTCAGAAC GTAGCCAGGGAACTGGTTGA
 GPR124 ACTCGGCAGAGGGTCTAGG CATGGATGGAGGCAGCTC
 ATP2A3 CAGATCCCACCCCTAGCAG TGCAGAGGGGAAACTGAGAC
 IRS2 CTGTGTGTGCCTGCGTAAC CGCACAGTGAGTAACACATCG
Oligonucleotides for ChIP on ERREs
 ONECUT2 GGCAGAGCTCGGAATACTGT CGGCAGAAAAGGTCACTGAG
 ZNF768 TGTTCTAGGTCTCCGTCCCT CTTCTCGCTGACCTTGGTCT
 GRWD1 CACAGTCTGGAGTCGGATGA AAACTGTGACCCCAGACCTT
 RPIA AAGCAGGGCCACAACTAAAA AGGCCTAGGGGCTGACTTTA
 RSAD1 CCCCTCAGTGTCTTCCCTTC CACATTCCCCTGTCTGTCCT
 ANKRD13B CATCTCCTCCACCCTTGAGA TGCTGTCCCTCTGCCTCTAT
 LEF1 CCCTACCCATCCTCACTGTC GGATGCAAGCACGAGAAGAG
 TMEM198 AGAGGGAAAGTTGGGGTCAC CCTTTGTCCACTGTCCTTGC
 BSN GATTGGCGTGAACTGGGTG CGTTGGGGAGAAGCGAATTT
 OXNAD1 TGGGCAGGGATAGAAATACG CTGACCATGGCAGTGTTTCA
 ABCF1 AATCCAAAGGCAGGGAGAGT CCTACCCCCAATGTTGTCAG
 SNX12 CCCATGAGGAAGTGAAGCAT CAGCCGTGATTCCTATCTCC
 ELK3 AAAGCCGGTGGTCTCTATTG TCGAAGGTAAACAGGGATGG
 ESRRA prox. CCATCCGAGTGGAATTTGAGTCCTAAAG GAACCGTAGACCCAGTAGCCCCACAGAG
 ESRRA dist. GTGGCCCACAGGTGTCGCTCAAGTCTTC GGATGCAGTGTCCTTCTCCCCAGATTG
siRNAs
 ERRα#1 GGCAGAAACCUAUCUCAGGUU CCUGAGAUAGGUUUCUGCCUC
 ERRα#2 GAAUGCACUGGUGUCACAUCUGCUG CAGCAGAUGAGACACCAGUGCUUC
 LSD1#1 ACUUUGUAACUGUCGAGCUGC GCAGCUCGACAGUUACAAAGU
 LSD1#2 CCACGGAGCGACAGAGCGAGC GCUCGCUCUGUCGCUCCGUGG
 NCOR1#1 CUCGUCUCAUCUCCGUUAA UUAACGGAGAUGAGACGAG
 NCOR1#2 CGAGUCAAGUUCAUUAACA UGUUAAUGAACUUGACUCG