Table 1.
ORGANISM | ABBR. | DNA type | DOCUMENTS BEFORE CLEAN-UP | DOCUMENTS AFTER CLEAN-UP | TOTAL (bp) | TOTAL GC% |
Dictyostelium discoideum | Dd | single genes | 492 | 440 | 966261 | 25.70 |
Plasmodium falciparum | Pf | single genes | 1652 | 790 | 1065133 | 27.11 |
chromosome II, III | 2 | 2 | 2007209 | 19.82 | ||
Tetrahymena thermophila | Tt | single genes | 109 | 97 | 214676 | 28.89 |
Candida albicans | Ca | single genes | 439 | 378 | 959035 | 35.21 |
Manduca sexta | Ms | single genes | 54 | 46 | 119657 | 35.62 |
Caenorhabditis elegans | Ce | single genes | 234 | 221 | 1319875 | 36.92 |
Schizosaccharomyces pombe | Spo | single genes | 813 | 720 | 1346439 | 37.54 |
Arabidopsis thaliana | At | single genes | 1908 | 1520 | 3139637 | 38.09 |
Schistosoma mansoni | Sm | single genes | 98 | 74 | 125605 | 38.37 |
Danio rerio | Dr | single genes | 339 | 266 | 603534 | 38.60 |
Saccharomyces cerevisiae | Sc | single genes | 2249 | 928 | 3815906 | 38.68 |
chromosome I-XVI | 16 | 16 | 11426263 | 38.45 | ||
Drosophila melanogaster | Dm | single genes | 1883 | 968 | 3459297 | 39.88 |
Strongylocentrotus purpuratus | Spu | single genes | 153 | 113 | 116647 | 41.78 |
Xenopus laevis | Xl | single genes | 568 | 411 | 805354 | 41.99 |
Oryza sativa | Os | single genes | 605 | 507 | 1514656 | 44.61 |
Trypanosoma brucei | Tb | single genes | 457 | 368 | 1039208 | 46.17 |
Fugu rubripes | Fr | single genes | 216 | 181 | 1737132 | 46.30 |
Zea mays | Zm | single genes | 629 | 480 | 1225027 | 46.92 |
Mus musculus | Mm | single genes | 9288 | 5179 | 11191148 | 47.36 |
Anopheles gambiae | Ag | single genes | 78 | 43 | 73592 | 48.20 |
Gallus gallus | Gg | single genes | 1868 | 1061 | 1910331 | 50.00 |
Toxoplasma gondii | Tg | single genes | 195 | 117 | 284187 | 50.70 |
Emericella nidulans | En | single genes | 72 | 62 | 165648 | 51.07 |
Aspergillus niger | An | single genes | 215 | 160 | 386447 | 52.65 |
Neurospora crassa | Nc | single genes | 252 | 217 | 494046 | 53.37 |
Leishmania major | Lm | single genes | 89 | 81 | 129155 | 59.11 |
Chlamydomonas reinhardtii | Cr | single genes | 136 | 114 | 349624 | 61.84 |