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Representative examples of partial dissociation events. (A) Cα RMSD timeseries of MHCI-bound Δ1C S8 (from its initial position in the X-ray crystal structure). The MHCIΔ1C structure shown is from a trajectory frame at t ≈ 0.35 µs; the corresponding point is labeled (*). (B) Cα RMSD timeseries of MHCIΔ2N DPA F3. The structure shown is from a trajectory frame at t ≈ 0.43 µs. Black lines show the reference MHCIPL system. 1-ns moving averages are overlaid on the timeseries (gray).
