Table 3.
Average Nucleotide Identity (ANI) and in silico DNA-DNA Hybridization (isDDH) for strains belonging to the Media complex.
| Clade | Strain | G + C content | A | B | C | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | |||
| A | 1- A. caviae LMG 13459 | 61.7% | 79.2 | 73.2 | 77.4 | 68.0 | 53.7 | 56.6 | 54.3 | 53.6 | 54.1 | 52.9 | 52.9 | 60.6 | 60.1 | |
| 2- BVH40 | 61.4% | 97.2 | 74.1 | 78.4 | 68.2 | 54.1 | 56.9 | 54.6 | 54.2 | 54.6 | 53.0 | 53.0 | 61.2 | 61.1 | ||
| 3- AK202 | 61.3% | 96.4 | 96.5 | 73.6 | 65.1 | 57.4 | 60.5 | 57.8 | 57.0 | 57.5 | 56.5 | 56.5 | 60.0 | 60.5 | ||
| 4- A. media 76C | 61.3% | 97.0 | 97.1 | 96.5 | 67.5 | 54.5 | 57.2 | 55.2 | 54.2 | 54.9 | 53.3 | 53.3 | 60.5 | 60.2 | ||
| 5- A. hydrophila 4AK4 | 62.0% | 95.8 | 95.8 | 95.3 | 95.7 | 53.7 | 55.3 | 53.9 | 53.2 | 54.0 | 53.3 | 53.3 | 61.0 | 60.6 | ||
| B | 6- A. caviae LMG 13464 | 61.3% | 93.2 | 93.2 | 93.9 | 93.3 | 93.1 | 74.9 | 78.9 | 80.3 | 79.6 | 78.8 | 78.7 | 57.2 | 57.0 | |
| 7- AK211 | 61.1% | 93.7 | 93.8 | 94.5 | 93.9 | 93.5 | 96.7 | 74.9 | 74.9 | 76.7 | 74.7 | 74.6 | 57.9 | 57.5 | ||
| 8- A. media CECT 4232T | 61.1% | 93.2 | 93.3 | 93.9 | 93.4 | 93.1 | 97.2 | 96.6 | 77.9 | 83.8 | 79.2 | 79.2 | 57.5 | 57.0 | ||
| 9- Aeromonas sp. CECT 7111 | 61.6% | 93.1 | 93.2 | 93.8 | 93.2 | 93.1 | 97.4 | 96.7 | 97.1 | 78.6 | 78.5 | 78.5 | 57.0 | 56.8 | ||
| 10- A. media WS | 60.7% | 93.2 | 93.2 | 94.0 | 93.3 | 93.2 | 97.2 | 96.8 | 97.7 | 97.2 | 79.5 | 79.4 | 57.4 | 57.2 | ||
| 11– A. media ARB13 | 61.0% | 92.9 | 93.0 | 93.7 | 93.0 | 93.1 | 97.2 | 96.7 | 97.2 | 97.2 | 97.1 | 100.0 | 57.4 | 56.8 | ||
| 12– A. media ARB20 | 61.0% | 93.0 | 93.0 | 93.7 | 93.0 | 93.1 | 97.2 | 96.7 | 97.2 | 97.2 | 97.1 | 100.0 | 57.3 | 56.7 | ||
| C | 13- 1086C | 62.2% | 94.5 | 94.6 | 94.3 | 94.4 | 94.6 | 93.9 | 94.0 | 93.9 | 93.8 | 93.9 | 93.9 | 93.9 | 81.9 | |
| 14- A. eucrenophila UTS 15 | 61.8% | 94.4 | 94.6 | 94.4 | 94.4 | 94.5 | 93.8 | 93.9 | 93.8 | 93.8 | 93.8 | 93.7 | 93.8 | 97.5 | ||
ANI values are displayed in bold in the lower triangle and isDDH values in the upper triangle. The isDDH values displayed are the upper limits of the 95% confidence intervals. Guanine + cytosine content is indicated for each genome (G + C content %).