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. 2017 Apr 17;83(9):e00133-17. doi: 10.1128/AEM.00133-17

TABLE 1.

Functional annotations of the hypothetical proteins

Protein Size (amino acids) Putative function Superfamily designation
Region (positions) Superfamily (specific hit/conserved domain) CDD accession no. E value
PcaA3 409 Pyridine nucleotide-disulphide oxidoreductase 147–228 Pyr_redox pfam00070 3.27e-15
322–405 Reductase_C pfam14759 5.97e-20
PcaE 275 Oxidoreductases 25–260 SDR_c cd05233 2.21e-62
PcaA1 400 Dioxygenase α-subunit 57–172 Rieske_RO_Alpha_N cd03469 2.71e-38
57–150 Rieske pfam00355 3.78e-22
PcaA2 103 Dioxygenase β-subunit 1–92 Ring_hydroxyl_B pfam00866 4.53e-10
PcaC 313 Dioxygenase 147–295 BphC1-RGP6_C_like cd07237 2.35e-71
14–135 BphC1-RGP6_N_like cd07252 8.73e-52
154–269 Glyoxalase pfam00903 3.36e-21
PcaA4 106 Ferredoxin 4–100 Rieske_RO_ferredoxin cd03528 5.14e-38
5–96 Rieske pfam00355 2.46e-26
PcaD 481 Monooxygenase 75–192 FMO-like pfam00743 7.55e-12
PcaR 231 Regulator 82–196 FCD (GntR family) pfam07729 1.96e-25
PcaB1 431 Dioxygenase α-subunit 183–411 RHO_alpha_C_NDO-like cd08881 6.03e-73
41–124 Rieske pfam00355 6.23e-19
PcaB2 175 Dioxygenase β-subunit 10–137 Ring_hydroxylating_dioxygenases_beta cd00667 1.87e-49
21–140 Ring_hydroxyl_B pfam00866 1.36e-46