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. 2017 Apr 18;7:46547. doi: 10.1038/srep46547

Table 1. Binding free energy between PFI-2 and SETD7 predicted by MM/GBSA method.

Contribution (R)-PFI-2/SETD7 (S)-PFI-2/SETD7
ΔEele −374.97 ± 3.67c −356.80 ± 3.81
ΔEvdw −53.44 ± 2.02 −46.85 ± 2.50
ΔGSA −6.57 ± 0.48 −6.78 ± 0.47
ΔGGB 385.17 ± 2.22 365.67 ± 2.28
ΔGnonpolara −60.01 ± 4.04 −53.63 ± 2.54
ΔGpolarb 10.20 ± 4.29 15.67 ± 4.44
ΔGtotal,GB −49.81 ± 5.89 −37.96 ± 5.11
TΔS 18.58 ± 2.18 22.12 ± 3.40
ΔGbind −23.23 ± 6.28 −15.84 ± 6.14

aΔGnonpolar = ΔEvdw + ΔGSA.

bΔGpolar = ΔEele + ΔGGB.

cstandard deviations calculated through 10 times of repeated sampling from last 50 ns trajectory.