Table 4.

There were 33-shared genera in the rumen of goats fed at a completed feed (CF) diet and 30 fed all forage (AF) diet as well as 26 shared by all goats

Phylum	Genus	Log-transformed proportion values
		CF	AF	All goats
Bacteroidetes	Prevotella	1.411)±1.172)	1.35±0.75	1.38±1.03
	Paraprevotella	−0.16±−0.18	−0.40±−0.61	−0.26±−0.30
	Hallella	−0.31±−0.23	−0.07±0.10	−0.17±−0.16
	Rikenella	−0.97±−1.12	−0.52±−0.40	−0.69±−0.54
	Barnesiella	−1.24±−1.37	Unshared genus	Unshared genus
Firmicutes	Ruminococcus	0.14±−0.27	0.53±0.29	0.37±0.23
	Butyrivibrio	0.57±0.69	0.52±0.24	0.55±0.54
	Succiniclasticum	0.15±0.32	0.28±0.40	0.22±0.35
	Clostridium IV	0.11±−0.21	−0.11±−0.40	0.01±−0.25
	Lachnospiracea_incertae_sedis	−0.22±−0.58	0.89±0.50	0.62±0.63
	Saccharofermentans	−0.09±−0.00	0.22±0.08	0.10±−0.00
	Oscillibacter	−0.33±−0.19	−0.64±−0.78	−0.46±−0.33
	Pseudobutyrivibrio	−0.33±−0.43	−0.81±−1.06	−0.51±−0.52
	Selenomonas	−0.61±−0.54	−1.37±−1.54	−0.84±−0.65
	Sporobacter	−0.84±−0.99	−0.52±−0.52	−0.65±−0.64
	Anaerovorax	−0.90±−0.25	−0.82±−0.92	−0.86±−1.05
	Clostridium XlVb	−0.99±−1.03	−1.02±−1.42	−1.01±−1.16
	Acetivibrio	−1.10±−1.20	−0.96±−1.04	−1.02±−1.11
	Anaerovibrio	−1.10±−1.35	Unshared genus	Unshared genus
	Roseburia	−1.21±−1.17	−0.61±−0.27	−0.81±−0.42
	Moryella	−1.47±−1.38	Unshared genus	Unshared genus
	Clostridium XlVa	Unshared genus	−2.72±−2.50	Unshared genus
Proteobacteria	Pseudomonas	0.11±0.07	−0.10±−1.42	−0.17±0.01
	Vampirovibrio	0.05±0.08	−0.22±−0.13	−0.06±−0.00
	Succinivibrio	−2.45±−2.06	Unshared genus	Unshared genus
	Desulfovibrio	−0.76±−0.51	Unshared genus	Unshared genus
	Acinetobacter	−0.95±−0.79	Unshared genus	Unshared genus
	Stenotrophomonas	−1.68±−1.67	−1.82±−2.23	−1.74±−1.82
	Sphingomonas	Unshared genus	−1.56±−1.87	Unshared genus
Verrucomicrobia	Subdivision5_genera_incertae_sedis	−1.27±−1.06	−1.81±−1.62	−1.46±−1.20
Tenericutes	Anaeroplasma	−0.08±−0.49	−0.51±−0.54	−0.24±−0.39
Lentisphaerae	Victivallis	Unshared genus	−0.28±−0.71	Unshared genus
TM7	TM7 genera incertae sedis	−0.37±−0.39	−0.47±−0.67	−0.42±−0.51
Spirochaetes	Treponema	−0.38±−0.66	−0.38±−0.41	−0.38±−0.52
	Spirochaeta	−0.84±−0.81	−0.65±−0.86	−0.73±−0.84
Euryarchaeota	Methanobrevibacter	−1.19±−1.31	Unshared genus	Unshared genus
SR1	SR1 genera incertae sedis	Unshared genus	−0.46±−0.37	Unshared genus

¹⁾Log-transformed proportion values of the average value of each sample.

²⁾Log-transformed proportion values of the standard deviation value of each sample.