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. 2017 Apr 4;2017:9210494. doi: 10.1155/2017/9210494

Table 1.

Candidates and oligos for MYOGENIN exon1 target positions for CRISPR/Cas9.

Position Target sequence Sequence information Number of target sites
Start–end +/− 20 bp + PAM GC (%) Tm (°C) 20 bp 12 bp 8 bp
143–165 cctgcctgtccacctccagggct 70 84 1 61 5171
147–169 cctgtccacctccagggcttcga 65 80 1 38 92,481
152–174 ccacctccagggcttcgaaccac 65 79 1 89 10,513
155–177 cctccagggcttcgaaccaccag 65 79 1 8 11,331
156–178 + ctccagggcttcgaaccaccagg 65 79 1 1 4654
158–180 ccagggcttcgaaccaccaggct 65 81 1 7 21,861
166–188 + tcgaaccaccaggctacgagcgg 60 77 1 10 12,349
170192 + accaccaggctacgagcggacgg 65 82 1 1 3812
171–193 ccaccaggctacgagcggacgga 70 82 1 8 1537
174–196 ccaggctacgagcggacggagct 70 83 1 3 479
191–213 + ggagctcaccctgagccccgagg 75 84 1 43 382

pX458-hMYOG+189_F primer: CACCaccaccaggctacgagcgga. pX458-hMYOG+189_R primer: AAACtccgctcgtagcctggtggt.