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. 2017 Apr 18;12(4):e0175420. doi: 10.1371/journal.pone.0175420

Table 1. Nucleotide sequences of the forward and reverse primers used for qPCR.

Gene accession forward primer reverse primer amplicon
Name number Sequence sequence length
elf1a AY422992 CTGGAGGCCAGCTCAAACAT TCAAGAAGAGTAGTACCGCTAGCATTAC 85
rpl13 NM_212784 TCTGGAGGACTGTAAGAGGTATGC AGACGCACAATCTTGAGAGCAG 147
crf BC164878 CGAGACATCCCAGTATCCAAAAAG TCCAACAGACGCTGCGTTAA 59
crf-bp NM_001003459 ACAATGATCTCAAGAGGTCCAT CCACCAAGAAGCTCAACAAA 66
mr NM_001100403 CTTCCAGGTTTCCGCAGTCTAC GGAGGAGAGACACATCCAGGAAT 74
grα EF436284.1 ACTCCATGCACGACTTGGTG GCATTTCGGGAAACTCCACG 90
grβ EF436285.1 GATGAACTACGAATGTCTTA GCAACAGACAGCCAGACAGCTCACT 210
bdnf NM_131595 AGAGCGGACGAATATCGCAG GTTGGAACTTTACTGTCCAGTCG 110
pcna AF140608.1 AAGGAGGATGAAGCGGTAACAAT GTCTTGGACAGAGGAGTGGC 104
neurod1 AF036148.1 TCCCTACTCCTACCAGACGC CAGTCTGTGAGGGTGGTGTC 135
igf1 NM_131825.2 GGCGCCTCGAGATGTATTGT CCTCGGCTCGAGTTCTTCTG 160
gh1 NM_001020492.2 GCATCAGCGTGCTCATCAAG TGAGACTGGTCTCCCCTACG 114
cart4 NM_001082932.1 GCTGAGGCACTCGATGAACT GAAGAAAGTGTTGCAGGCGG 174
socs3a NM_199950.1 GCAGGAAGACTGTGAACGGA CAGTGGCTGGACAACTCCAT 192
irg1l NM_001077607.1 TTTCAAGCGCTTTCCTGCAC GAGAGTGGCACCCTAAGCAG 141
mpeg1.1 NM_212737.1 CCACAGAAAGTGAGCGGAGT GGACTTGAACCCGTGCTGTA 196
mpeg1.2 NM_001020586.1 CACGGCGGGGCTTTATTCTA GAGGTCAGGGAATACGGCTG 135

Genes: stress-axis genes: corticotropin-releasing factor (crf), crf-binding protein (crf-bp), mineralocorticoid receptor (mr), glucocorticoid receptor α (grα) and β (grβ); ‘(neuro)development related’ genes: proliferating cell nuclear antigen (pcna); brain derived neurotrophic factor (bdnf); neuronal differentiation factor 1 (neurod1); insulin growth-factor 1 (igf1); growth hormone 1 (gh1); cocaine- and amphetamine-regulated transcript 4 (cart4); ‘(innate) immune system related’ genes: suppressor of cytokine signalling 3a (socs3a), immune-responsive gene 1-like (irg1l), macrophage-expressed gene 1 (mpeg1.1; also called mpeg1), macrophage-expressed gene 1.2 (mpeg1.2); reference genes: elongation factor 1α (elf1α); ribosomal protein L13 (rpl13).