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. 2017 Apr 19;14:26. doi: 10.1186/s12977-017-0350-9

Table 1.

Clinical findings, HTLV-1 subtype, proviral loads, and HTLV-1 sequence changes in patients of HAM/TSP and ACs

f-HAM/TSP (n = 30) s-HAM/TSP (n = 92) ACs (n = 89) p value
Age (years old) 54.7 ± 13.3 58.4 ± 13.2 52.7 ± 14.4 0.021
Male (N,  %) 5, 17% 29, 32% 36, 40% 0.052
Transcontinental/Japanese subtype (n) 10/20 21/71 6/83 <0.001
Anti-HTLV-1 antibodiese 20,992 ± 33,571 (N = 29) 30,707 ± 43,985 (N = 80) 7667 ± 17,209 (N = 80) <0.001
HTLV-1 proviral loads (copies/104 PBMCs) 819 ± 743 813 ± 936 366 ± 657 <0.001
No. of SNPs (reference AB513134)a 34.2 ± 18.7 29.6 ± 19.2 22.3 ± 12.0 0.004
No. of SNPs (each reference)b 21.4 ± 6.8 20.3 ± 7.5 19.5 ± 5.3 0.392
No. of G-to-A mutations (reference AB513134)c 10.2 ± 4.6 8.9 ± 4.4 7.4 ± 3.2 0.003
No. of G-to-A mutations (each reference)d 6.6 ± 2.5 6.3 ± 2.4 6.7 ± 2.2 0.422

Data are mean ± SD

f-HAM/TSP familial HTLV-1 associated myelopathy/tropical spastic paraparesis (HAM/TSP) patients, s-HAM/TSP sporadic HAM/TSP patients, ACs asymptomatic HTLV-1 carriers

aNumber of SNPs of complete HTLV-1 sequences using the data mapped to AB513134

bNumber of SNPs of complete HTLV-1 sequences using the data mapped to each reference; transcontinental subtype, consensus transcontinental reference; Japanese subtype, AB513134

cNumber of G-to-A mutations of complete HTLV-1 sequences using the data mapped to AB513134

dNumber of G-to-A mutations of complete HTLV-1 sequences using the data mapped to each reference; transcontinental subtype, consensus transcontinental reference; Japanese subtype, AB513134

eParticle aggregation method