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. 2017 Apr 20;8:618. doi: 10.3389/fpls.2017.00618

Table 1.

Top 50 GmELF4 network genes.

MR1 PCC2 G. max v1.03 G. max Wm82.a2.v14 Annotation5
1.0 0.899 Glyma11g35270 Glyma.11G229700 EARLY FLOWERING 4-like
5.5 0.729 Glyma12g05890 Glyma.12G055000 JUMONJI transcription factor
6.9 0.764 Glyma17g36060 Glyma.17G242100 COLD REGULATED PROTEIN 27
7.6 0.768 Glyma20g03910 Glyma.20G031200 Unknown protein
11.6 0.680 Glyma02g38870 Glyma.02G223700 C2C2 (Zn) CO-like transcription factor
12.7 0.624 Glyma18g46020 Glyma.18G226200 METHYLTRANSFERASE
14.4 0.730 Glyma02g45810 Glyma.02G288700 HEAT SHOCK PROTEIN 42
19.6 0.672 Glyma11g19500 No mapping
20.0 0.694 Glyma09g07240 Glyma.16G163200 PROTEIN GIGANTEA
20.5 0.696 Glyma06g35550 Glyma.06G235100 Protein of unknown function (DUF3082)
21.4 0.693 Glyma14g02970 Glyma.14G026100 HEAT SHOCK PROTEIN 42
23.7 0.520 Glyma04g05280 Glyma.04G050200 Protein EARLY FLOWERING 3
24.3 0.676 Glyma18g20600 Glyma.18G142500 Alpha-glucan, water dikinase/starch-related R1 protein
26.5 0.515 Glyma16g05540 Glyma.16G050900 ZINC FINGER PROTEIN CONSTANS-LIKE 14-RELATED
26.7 0.642 Glyma18g05060 Glyma.18G044300 ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN EMB506
28.6 0.466 Glyma14g36930 Glyma.14G190400 C2C2 (Zn) CO-like transcription factor
32.0 0.665 Glyma02g15370 Glyma.02G136000 Ent-kaurene synthase/Ent-kaurene synthetase B
36.1 0.604 Glyma05g29200 Glyma.05G159400 SHAGGY-RELATED PROTEIN KINASE ETA
37.1 0.603 Glyma02g45280 Glyma.02G283500 HXXXD-TYPE ACYL-TRANSFERASE-RELATED
37.4 0.494 Glyma20g33810 Glyma.20G196000 GLUCOSYL/GLUCURONOSYL TRANSFERASES
40.5 0.618 Glyma17g12800 No mapping
46.3 0.640 Glyma07g01400 Glyma.07G011700 PHOSPHATASE, ORPHAN 1, 2
46.4 0.631 Glyma18g07520 Glyma.18G067500 Similar to maternal effect embryo arrest 5
53.6 0.577 Glyma02g46870 Glyma.02G299100 SERINE ACETYLTRANSFERASE 1, CHLOROPLASTIC-RELATED
54.7 0.608 Glyma08g45150 Glyma.08G334500 Similar to maternal effect embryo arrest 5
56.9 0.524 Glyma12g04750 No mapping
59.8 0.673 Glyma07g31740 Glyma.07G197600 Molecular chaperone (DnaJ superfamily)
60.9 0.572 Glyma17g13780 Glyma.17G128500 MYB/HD-like transcription factor
61.9 0.556 Glyma16g33060 Glyma.16G205500 APO PROTEIN 1, CHLOROPLASTIC
62.4 0.551 Glyma11g15600 Glyma.U034800 Unknown protein
66.3 0.566 Glyma13g40850 Glyma.13G333300 METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 1-RELATED
75.9 0.527 Glyma06g13190 Glyma.06G126500 PROTEIN DHS-1
78.4 0.529 Glyma17g18010 Glyma.17G165200 METAL TRANSPORTER NRAMP2-RELATED
83.0 0.634 Glyma12g15560 Glyma.12G130000 DNAJ HOMOLOG DNJ-5
83.9 0.620 Glyma08g12370 Glyma.08G117200 SHAGGY-RELATED PROTEIN KINASE ETA
85.9 0.671 Glyma16g26900 Glyma.16G153000 NDH-DEPENDENT CYCLIC ELECTRON FLOW 5
86.4 0.456 Glyma06g24420 No mapping
90.0 0.503 Glyma13g31600 No mapping
91.6 0.576 Glyma03g03590 Glyma.03G030600 CYTOCHROME P450 71B21-RELATED
93.2 0.573 Glyma06g13450 Glyma.06G129100 ATP-DEPENDENT CLP PROTEASE REGULATORY SUBUNIT CLPX
100 0.466 Glyma18g14490 No mapping
105 0.541 Glyma06g20830 Glyma.06G193800 GIBBERELLIN-REGULATED PROTEIN 12-RELATED
105 0.620 Glyma11g21670 Glyma.11G155300 Transglutaminase-like superfamily (Transglut_core2)
107 0.559 Glyma03g03630 Glyma.03G030800 CYTOCHROME P450 71B21-RELATED
108 0.655 Glyma08g39110 Glyma.08G283700 Alpha-glucan, water dikinase/starch-related R1 protein
109 0.652 Glyma16g29640 Glyma.16G177800 Protein of unknown function (DUF3464) (DUF3464)
111 0.592 Glyma15g11800 Glyma.15G111400 CHAPERONIN-LIKE RBCX PROTEIN
119 0.479 Glyma18g51380 Glyma.18G278800 S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME-RELATED
119 0.456 Glyma15g40940 Glyma.15G257600 Deacetoxyvindoline 4-hydroxylase/desacetyoxyvindoline-17-hydroxylase
120 0.438 Glyma08g22370 Glyma.08G209300 Unknown protein

1Mutual rank (MR) for gene co-expression (Obayashi and Kinoshita, 2009);

2Pearson’s correlation coefficients (PCCs);

3Genemodel at the soybean genome version 1.0 (http://phytozome.net/soybean);

4Genemodel at the soybean genome version Wm82.a2.v14 (http://phytozome.net/soybean]);

5Gene annotation at the Phytozome database (http://phytozome.net/soybean).