Table 3.
Transcriptome assembly descriptive statistics
| Gene set | HS-dependent reduction |
HS-dependent accumulation |
||||||
|---|---|---|---|---|---|---|---|---|
| Library | Moneymaker | Red setter | Moneymaker | Red setter | ||||
| CO | HS | CO | HS | CO | HS | CO | HS | |
| Assembled transcripts | 1,868 | 1,639 | 1,597 | 1,481 | 8,347 | 9,088 | 6,910 | 8,057 |
| Transcripts with SolycID | 1,746 | 1,552 | 1,522 | 1,400 | 7,868 | 8,652 | 6,636 | 7,716 |
Given is the number of assembled transcripts and assembled transcripts with assigned SolycID for the Moneymaker and Red Setter CO and HS libraries with HS-dependent reduction or accumulation of alternative spliced transcripts.