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. 2017 Jan 27;24(2):179–192. doi: 10.1093/dnares/dsw054

Table 1.

Summary of the de novo genome assembly of R.speciosa

Category Contigs Scaffolds (all) Scaffold (>1 k)
Number of contigs 808,710 341,168 84,681
N50 (bp) 1,551 17,908 19,156
L50 92,735 14,124 10,074
Largest contig/scaffolds (bp) 34,954 345,229 345,229
GC content (%) 39.27 38.80 38.77
N’s percentage 3.62 3.82
Total span (M) 733 1,021 892
Estimated coverage (%) 67.25 93.69 81.89
Number of gene models 40,124
Mean transcript length 1,131 bp
Number of genes annotated 37,848 (94.32%)