Table 4. Significant SNPs identified for Heart Girth (HG) and Hip Height (HH) in Chinese Holstein.
| SNP* | Chr | Position (bp) | MAF | HG | HH | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| 6 | 12 | 18 | 24 | 6 | 12 | 18 | 24 | ||||
| ARS-BFGL-NGS-76122 | 1 | 151590393 | 0.38 | 1.04E-09 | 8.06E-08 | ||||||
| ARS-BFGL-NGS-36823 | 3 | 26971936 | 0.08 | 4.51E-08 | |||||||
| ARS-BFGL-NGS-111370 | 3 | 27115580 | 0.19 | 4.24E-11 | 5.02E-08 | ||||||
| ARS-BFGL-NGS-110127 | 3 | 87809919 | 0.38 | 3.58E-08 | |||||||
| BTA-77968-no-rs | 6 | 18898455 | 0.08 | 3.30E-08 | |||||||
| BTB-00262834 | 6 | 73008129 | 0.14 | 1.61E-07 | |||||||
| ARS-BFGL-NGS-82167 | 6 | 98952769 | 0.41 | 3.32E-09 | |||||||
| ARS-BFGL-NGS-79814 | 6 | 108635821 | 0.30 | 2.09E-07 | 5.26E-08 | ||||||
| BTA-92628-no-rs | 8 | 4546756 | 0.27 | 1.34E-07 | |||||||
| ARS-BFGL-NGS-39319 | 8 | 31409233 | 0.38 | 1.61E-07 | |||||||
| ARS-BFGL-NGS-8362 | 10 | 7943252 | 0.20 | 6.60E-08 | |||||||
| ARS-BFGL-NGS-33225 | 11 | 12478437 | 0.36 | 1.07E-07 | |||||||
| Hapmap48235-BTA-17587 | 12 | 23340411 | 0.49 | 7.99E-09 | |||||||
| ARS-BFGL-NGS-70821 | 14 | 3078843 | 0.24 | 1.46E-08 | |||||||
| BTB-00553140 | 14 | 13051936 | 0.12 | 2.14E-07 | |||||||
| BTB-01912619 | 15 | 20712027 | 0.44 | 9.85E-08 | |||||||
| BTA-08811-rs29022367 | 15 | 36997905 | 0.27 | 1.27E-07 | |||||||
| ARS-BFGL-NGS-88748 | 19 | 62087156 | 0.22 | 5.15E-08 | |||||||
| ARS-BFGL-NGS-83478 | 22 | 9271442 | 0.15 | 6.71E-09 | 1.48E-10 | 1.38E-10 | 5.67E-13 | ||||
| Hapmap47137-BTA-95505 | 25 | 8060061 | 0.45 | 1.25E-09 | 7.52E-09 | ||||||
| ARS-BFGL-NGS-13985 | 25 | 35071379 | 0.23 | 1.70E-07 | 2.42E-08 | ||||||
| ARS-BFGL-NGS-1643 | 25 | 37783875 | 0.40 | 8.11E-08 | |||||||
| ARS-BFGL-NGS-38901 | 29 | 400533 | 0.24 | 1.40E-07 | |||||||
| BTB-01040075 | X | 5644107 | 0.47 | 5.67E-09 | |||||||
| ARS-BFGL-NGS-14625 | X | 13611851 | 0.21 | 1.30E-08 | 1.26E-07 | ||||||
| ARS-BFGL-NGS-118669 | X | 105267785 | 0.19 | 3.05E-08 | |||||||
| Hapmap58680-rs29019274 | X | 112742618 | 0.36 | 6.73E-10 | |||||||
* All the SNPs listed were genome-wide significant in at least one trait (Bonferroni cutoff = 2.38E-7).
The numbers in the column headings below the trait names indicate the age of measurement, e.g., HG6 = heart girth at 6 months.