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. 2017 Apr 20;12(4):e0176422. doi: 10.1371/journal.pone.0176422

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© 2017 Volpini et al

This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

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Fig 2 — The phylogenetic tree created using the neighbour-joining method from the global alignment of full and partial sequences of the HPV16 genome. E-European variants (sublineages A1-A4); NE-non-European variants (sublineages B1-D3). The reference sequences of each HPV16 lineage was obtained from GenBank (ID/lineage/acession number: 16Ref/A1/K02718; w0122/A2/AF536179; AS411/A3/HQ644236; w0724/A4/AF534061; w0236/B1/AF536180; Z109/B2/HQ644298; R460/C/AF472509; Qv00512/D1/HQ644257; Qv15321/D2/AY686579; Qv00995/D3/AF402678).